Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CLUHP2-201ENST00000426660 1303 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 C2orf27AP3-201ENST00000434123 579 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC007389.4-201ENST00000454674 793 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC015936.2-201ENST00000593177 259 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC004466.1-201ENST00000599515 1080 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC138696.2-201ENST00000607376 223 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AL354718.3-201ENST00000616414 581 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AC138466.3-201ENST00000619983 221 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CR382287.1-201ENST00000623954 586 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AL358472.5-202ENST00000641448 1267 ntBASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SPTSSAQ969W0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 MSTO2P-201ENST00000314835 1709 ntBASIC12.97□□□□□ -0.33
SPTSSAQ969W0 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FKBP4P6-201ENST00000457486 1332 ntBASIC12.97□□□□□ -0.33
SPTSSAQ969W0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 GCOM2-201ENST00000509133 1104 ntBASIC12.97□□□□□ -0.33
SPTSSAQ969W0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms