Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 KRT126P-201ENST00000549467 1181 ntBASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
BEST4Q8NFU0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 Z97205.2-201ENST00000564697 1639 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AC015922.1-201ENST00000421102 1152 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 KRT18P43-201ENST00000469825 1281 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 SLC25A1P1-201ENST00000528351 927 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 AC007967.4-201ENST00000614700 386 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 C20orf181-201ENST00000623918 480 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.84□□□□□ -0.35
BEST4Q8NFU0 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.84□□□□□ -0.35
BEST4Q8NFU0 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
BEST4Q8NFU0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms