Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 KRT18P36-201ENST00000411618 1276 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AKR7A2P1-201ENST00000460134 915 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AC003686.1-201ENST00000550956 1034 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AC009779.1-201ENST00000551138 283 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AC027237.1-201ENST00000560942 655 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AL132994.2-201ENST00000603120 687 ntBASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
ARHGEF39Q8N4T4 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC022494.1-201ENST00000466044 728 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC005740.2-201ENST00000511085 419 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SCARNA20.5-201ENST00000516991 142 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 RBM8B-201ENST00000555532 525 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SORD2P-201ENST00000558556 1069 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 MIR6074-201ENST00000612054 107 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 LINC00552-201ENST00000625151 2579 ntBASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ARHGEF39Q8N4T4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms