Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SYNPOQ8N3V7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 OR2K2-202ENST00000374428 1038 ntBASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 WT1-AS_6.1-201ENST00000614919 121 ntBASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AP001065.2-201ENST00000617205 644 ntBASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AC242376.2-201ENST00000619355 883 ntBASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 TCAF2P1-201ENST00000291129 2421 ntBASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 LILRP1-201ENST00000444199 1370 ntBASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SYNPOQ8N3V7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 FAM45BP-202ENST00000592932 1624 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 SALL4P5-201ENST00000419001 1760 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AP000356.3-201ENST00000382243 753 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AL645933.1-201ENST00000440087 609 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 GCOM2-201ENST00000509133 1104 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 CFL1-206ENST00000527344 962 ntTSL 2 BASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 PHBP15-201ENST00000574228 665 ntBASIC14.96□□□□□ -0.01
SYNPOQ8N3V7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms