Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 SHC1P1-201ENST00000425230 1745 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AC022616.1-201ENST00000518688 554 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 C2orf69P1-201ENST00000563532 1093 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 DUX4L47-201ENST00000566374 394 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AC005632.3-201ENST00000605544 308 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AC007326.2-201ENST00000624224 7579 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AL391005.1-201ENST00000623953 2435 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 AC012044.1-201ENST00000603431 297 ntBASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RP1L1Q8IWN7 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 AL137783.1-201ENST00000623494 1896 ntBASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 AC244394.1-201ENST00000435000 1665 ntBASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 AP000356.3-201ENST00000382243 753 ntBASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CHCHD2P9-201ENST00000461726 456 ntBASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 MEG3_2.1-201ENST00000611456 105 ntBASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 LINC01815-202ENST00000641468 1409 ntBASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RP1L1Q8IWN7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms