Protein–RNA interactions for Protein: Q6P435

Putative uncharacterized SMG1-like protein, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q6P435 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.35□□□□□ -0.43
Q6P435 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.35□□□□□ -0.43
Q6P435 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Q6P435 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.35□□□□□ -0.43
Q6P435 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 HSPA8P5-201ENST00000456928 2069 ntBASIC12.35□□□□□ -0.43
Q6P435 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC12.35□□□□□ -0.43
Q6P435 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Q6P435 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Q6P435 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 AL512384.1-201ENST00000406683 331 ntBASIC12.35□□□□□ -0.43
Q6P435 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.35□□□□□ -0.43
Q6P435 AC016694.1-201ENST00000434179 700 ntBASIC12.35□□□□□ -0.43
Q6P435 TTTY23B-201ENST00000442790 549 ntBASIC12.35□□□□□ -0.43
Q6P435 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC12.35□□□□□ -0.43
Q6P435 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.35□□□□□ -0.43
Q6P435 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.35□□□□□ -0.43
Q6P435 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.35□□□□□ -0.43
Q6P435 AP005018.1-201ENST00000525475 301 ntBASIC12.35□□□□□ -0.43
Q6P435 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
Q6P435 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.35□□□□□ -0.43
Q6P435 MIR4683-201ENST00000579659 81 ntBASIC12.35□□□□□ -0.43
Q6P435 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.35□□□□□ -0.43
Q6P435 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Q6P435 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.35□□□□□ -0.43
Q6P435 AC002472.3-201ENST00000640124 621 ntBASIC12.35□□□□□ -0.43
Q6P435 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.35□□□□□ -0.43
Q6P435 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Q6P435 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Q6P435 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.35□□□□□ -0.43
Q6P435 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Q6P435 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Q6P435 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Q6P435 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Q6P435 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Q6P435 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.34□□□□□ -0.43
Q6P435 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.34□□□□□ -0.43
Q6P435 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.34□□□□□ -0.43
Q6P435 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Q6P435 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.34□□□□□ -0.43
Q6P435 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Q6P435 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 KRT8P28-201ENST00000433288 1390 ntBASIC12.34□□□□□ -0.43
Q6P435 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Q6P435 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.34□□□□□ -0.43
Q6P435 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Q6P435 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Q6P435 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.34□□□□□ -0.43
Q6P435 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.34□□□□□ -0.43
Q6P435 ARSEP1-201ENST00000420443 635 ntBASIC12.34□□□□□ -0.43
Q6P435 CNN2P8-201ENST00000421872 913 ntBASIC12.34□□□□□ -0.43
Q6P435 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Q6P435 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.34□□□□□ -0.43
Q6P435 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.34□□□□□ -0.43
Q6P435 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Q6P435 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.34□□□□□ -0.43
Q6P435 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.34□□□□□ -0.43
Q6P435 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.34□□□□□ -0.43
Q6P435 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.34□□□□□ -0.43
Q6P435 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Q6P435 AC078819.1-201ENST00000547454 765 ntBASIC12.34□□□□□ -0.43
Q6P435 AC012085.1-201ENST00000548270 765 ntBASIC12.34□□□□□ -0.43
Q6P435 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms