Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 SSR4P1-203ENST00000599569 2260 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AC234644.1-201ENST00000406065 370 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 PSMD4P1-201ENST00000433951 1109 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 ST13P19-201ENST00000442505 1124 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AL022344.2-201ENST00000568976 968 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AC005041.3-201ENST00000606287 649 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AL591471.1-201ENST00000621855 229 ntBASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LYSMD4Q5XG99 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 AP002353.1-201ENST00000528257 1599 ntBASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 IDS-203ENST00000428056 1213 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 AL139008.1-201ENST00000437894 228 ntBASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 AC024293.1-201ENST00000467930 498 ntBASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 LINC00634-202ENST00000505157 222 ntBASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LYSMD4Q5XG99 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 MIR645-201ENST00000385283 94 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms