Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC245369.7-201ENST00000631386 350 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AF274858.1-201ENST00000406288 372 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC073210.1-201ENST00000414799 232 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 RN7SL767P-201ENST00000493013 295 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 CICP6-201ENST00000457191 2729 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 GOLGA8UP-201ENST00000527159 1755 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PIFO-201ENST00000369737 746 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 FAM21EP-201ENST00000417804 985 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 IFNWP2-201ENST00000431203 580 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 AC105917.1-201ENST00000506637 2539 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SOD2-205ENST00000444946 917 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
VPS13DQ5THJ4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 PES1P2-201ENST00000449745 1735 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC027612.2-202ENST00000445955 1199 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC068760.1-201ENST00000493579 1953 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC9.55□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms