Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CD164-210ENST00000512821 964 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AC091544.8-201ENST00000619490 361 ntBASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AC004923.1-202ENST00000642106 209 ntBASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.92□□□□□ -0.34
FREM1Q5H8C1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 OR2R1P-201ENST00000441404 914 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 AC005077.2-201ENST00000449786 690 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 RN7SL774P-201ENST00000577467 290 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 AL162426.1-201ENST00000624141 743 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 EIF4HP1-201ENST00000453115 687 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 TPI1-206ENST00000488464 791 ntTSL 5 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 AF254983.2-201ENST00000612331 135 ntBASIC12.91□□□□□ -0.34
FREM1Q5H8C1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
FREM1Q5H8C1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms