Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.93■□□□□ 0.3
USH1GQ495M9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USH1GQ495M9 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
USH1GQ495M9 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
USH1GQ495M9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USH1GQ495M9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USH1GQ495M9 FAM90A7P-201ENST00000382628 1395 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 FAM90A23P-201ENST00000400136 1395 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USH1GQ495M9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.92■□□□□ 0.3
USH1GQ495M9 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.92■□□□□ 0.3
USH1GQ495M9 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.92■□□□□ 0.3
USH1GQ495M9 AC125604.1-201ENST00000496255 707 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 AP001505.2-201ENST00000616815 443 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 AL805961.1-203ENST00000641078 1258 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.92■□□□□ 0.3
USH1GQ495M9 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 MTHFR-210ENST00000641407 2387 ntBASIC16.92■□□□□ 0.3
USH1GQ495M9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USH1GQ495M9 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
USH1GQ495M9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 MYO15B-237ENST00000642007 4893 ntBASIC16.91■□□□□ 0.3
USH1GQ495M9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
USH1GQ495M9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.91■□□□□ 0.3
USH1GQ495M9 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.91■□□□□ 0.3
USH1GQ495M9 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 CICP14-201ENST00000629111 2732 ntBASIC16.91■□□□□ 0.3
USH1GQ495M9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.91■□□□□ 0.3
USH1GQ495M9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 AC015688.4-201ENST00000580780 1647 ntBASIC16.91■□□□□ 0.3
USH1GQ495M9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.91■□□□□ 0.3
USH1GQ495M9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
USH1GQ495M9 TMBIM7P-202ENST00000641474 1516 ntBASIC16.91■□□□□ 0.3
USH1GQ495M9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
USH1GQ495M9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.9■□□□□ 0.3
USH1GQ495M9 KRT8P28-201ENST00000433288 1390 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 AL590440.2-201ENST00000641973 1595 ntBASIC16.9■□□□□ 0.3
USH1GQ495M9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
USH1GQ495M9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.9■□□□□ 0.3
USH1GQ495M9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms