Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CD47Q08722 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.81□□□□□ -0.2
CD47Q08722 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
CD47Q08722 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.81□□□□□ -0.2
CD47Q08722 AC093512.1-201ENST00000617969 520 ntBASIC13.81□□□□□ -0.2
CD47Q08722 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.81□□□□□ -0.2
CD47Q08722 AC114271.1-201ENST00000612689 2813 ntBASIC13.81□□□□□ -0.2
CD47Q08722 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD47Q08722 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.8□□□□□ -0.2
CD47Q08722 AC068760.1-201ENST00000493579 1953 ntBASIC13.8□□□□□ -0.2
CD47Q08722 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CD47Q08722 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.8□□□□□ -0.2
CD47Q08722 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.8□□□□□ -0.2
CD47Q08722 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.8□□□□□ -0.2
CD47Q08722 TOMM22P5-201ENST00000416399 439 ntBASIC13.8□□□□□ -0.2
CD47Q08722 AL512638.1-201ENST00000457493 794 ntBASIC13.8□□□□□ -0.2
CD47Q08722 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.8□□□□□ -0.2
CD47Q08722 ZNF890P-202ENST00000530367 1156 ntBASIC13.8□□□□□ -0.2
CD47Q08722 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CD47Q08722 AC006538.3-201ENST00000612495 578 ntBASIC13.8□□□□□ -0.2
CD47Q08722 AC004461.2-201ENST00000629517 803 ntBASIC13.8□□□□□ -0.2
CD47Q08722 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 AL360270.3-201ENST00000609118 1348 ntBASIC13.8□□□□□ -0.2
CD47Q08722 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CD47Q08722 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.8□□□□□ -0.2
CD47Q08722 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 AC111170.3-201ENST00000624282 2464 ntBASIC13.8□□□□□ -0.2
CD47Q08722 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CD47Q08722 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD47Q08722 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD47Q08722 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CD47Q08722 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD47Q08722 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.79□□□□□ -0.2
CD47Q08722 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD47Q08722 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.79□□□□□ -0.2
CD47Q08722 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.79□□□□□ -0.2
CD47Q08722 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CD47Q08722 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CD47Q08722 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms