Protein–RNA interactions for Protein: Q05655

PRKCD, Protein kinase C delta type, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCDQ05655 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCDQ05655 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 AL139094.1-201ENST00000405549 1188 ntBASIC13.69□□□□□ -0.22
PRKCDQ05655 MRPS18AP1-201ENST00000414458 589 ntBASIC13.69□□□□□ -0.22
PRKCDQ05655 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCDQ05655 AL512638.1-201ENST00000457493 794 ntBASIC13.69□□□□□ -0.22
PRKCDQ05655 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCDQ05655 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.69□□□□□ -0.22
PRKCDQ05655 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCDQ05655 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCDQ05655 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.69□□□□□ -0.22
PRKCDQ05655 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.69□□□□□ -0.22
PRKCDQ05655 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCDQ05655 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
PRKCDQ05655 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.69□□□□□ -0.22
PRKCDQ05655 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PRKCDQ05655 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRKCDQ05655 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PRKCDQ05655 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PRKCDQ05655 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 AGGF1P1-201ENST00000509500 2073 ntBASIC13.68□□□□□ -0.22
PRKCDQ05655 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.68□□□□□ -0.22
PRKCDQ05655 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.68□□□□□ -0.22
PRKCDQ05655 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.68□□□□□ -0.22
PRKCDQ05655 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 SPDYE19P-201ENST00000338590 713 ntBASIC13.68□□□□□ -0.22
PRKCDQ05655 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
PRKCDQ05655 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.68□□□□□ -0.22
PRKCDQ05655 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.68□□□□□ -0.22
PRKCDQ05655 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.68□□□□□ -0.22
PRKCDQ05655 AL390955.2-201ENST00000603032 514 ntBASIC13.68□□□□□ -0.22
PRKCDQ05655 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.68□□□□□ -0.22
PRKCDQ05655 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
PRKCDQ05655 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PRKCDQ05655 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRKCDQ05655 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PRKCDQ05655 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms