Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.51■□□□□ 0.07
IRX4P78413 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.51■□□□□ 0.07
IRX4P78413 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.51■□□□□ 0.07
IRX4P78413 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
IRX4P78413 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.5■□□□□ 0.07
IRX4P78413 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
IRX4P78413 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.5■□□□□ 0.07
IRX4P78413 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.5■□□□□ 0.07
IRX4P78413 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.5■□□□□ 0.07
IRX4P78413 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.5■□□□□ 0.07
IRX4P78413 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
IRX4P78413 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
IRX4P78413 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
IRX4P78413 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
IRX4P78413 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
IRX4P78413 ACKR1-201ENST00000368121 1240 ntBASIC15.49■□□□□ 0.07
IRX4P78413 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.49■□□□□ 0.07
IRX4P78413 AC022137.2-201ENST00000503482 481 ntBASIC15.49■□□□□ 0.07
IRX4P78413 SLED1-202ENST00000512051 380 ntBASIC15.49■□□□□ 0.07
IRX4P78413 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.49■□□□□ 0.07
IRX4P78413 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.49■□□□□ 0.07
IRX4P78413 AC244452.3-201ENST00000636814 210 ntBASIC15.49■□□□□ 0.07
IRX4P78413 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.49■□□□□ 0.07
IRX4P78413 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
IRX4P78413 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
IRX4P78413 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.49■□□□□ 0.07
IRX4P78413 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms