Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 AC007663.3-201ENST00000609632 465 ntBASIC16.98■□□□□ 0.31
CHMP4BP1P59074 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 PRSS30P-206ENST00000641773 873 ntBASIC16.98■□□□□ 0.31
CHMP4BP1P59074 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP4BP1P59074 CICP11-201ENST00000434745 2827 ntBASIC16.97■□□□□ 0.31
CHMP4BP1P59074 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP4BP1P59074 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC041040.2-201ENST00000622926 2899 ntBASIC16.96■□□□□ 0.31
CHMP4BP1P59074 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC117489.1-201ENST00000625169 3217 ntBASIC16.96■□□□□ 0.31
CHMP4BP1P59074 OR2I1P-209ENST00000641730 5365 ntBASIC16.96■□□□□ 0.31
CHMP4BP1P59074 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 EIF4HP1-201ENST00000453115 687 ntBASIC16.96■□□□□ 0.31
CHMP4BP1P59074 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AC138028.6-201ENST00000616106 1482 ntBASIC16.96■□□□□ 0.31
CHMP4BP1P59074 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 AL157414.3-201ENST00000624276 1954 ntBASIC16.96■□□□□ 0.31
CHMP4BP1P59074 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHMP4BP1P59074 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms