Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN2P57739 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLDN2P57739 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLDN2P57739 ELK2AP-201ENST00000392510 1007 ntBASIC14.54□□□□□ -0.08
CLDN2P57739 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 PDIA3P2-201ENST00000428073 158 ntBASIC14.54□□□□□ -0.08
CLDN2P57739 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 RTN3P1-201ENST00000536295 711 ntBASIC14.54□□□□□ -0.08
CLDN2P57739 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.54□□□□□ -0.08
CLDN2P57739 AL157813.1-201ENST00000612996 587 ntBASIC14.54□□□□□ -0.08
CLDN2P57739 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.54□□□□□ -0.08
CLDN2P57739 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CLDN2P57739 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
CLDN2P57739 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN2P57739 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 KRT8P21-201ENST00000430398 1491 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN2P57739 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN2P57739 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CLDN2P57739 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN2P57739 HINT2P1-201ENST00000419438 481 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 AC006335.1-201ENST00000445200 547 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 EEF1DP6-201ENST00000449232 372 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 AC116345.2-201ENST00000512837 523 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.53□□□□□ -0.08
CLDN2P57739 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.53□□□□□ -0.08
CLDN2P57739 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 AC012044.1-201ENST00000603431 297 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 AL353770.1-201ENST00000614915 403 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.53□□□□□ -0.08
CLDN2P57739 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.53□□□□□ -0.08
CLDN2P57739 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN2P57739 TCAF2P1-201ENST00000291129 2421 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 AC006504.5-208ENST00000588784 2401 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CLDN2P57739 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CLDN2P57739 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.53□□□□□ -0.08
CLDN2P57739 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.53□□□□□ -0.08
CLDN2P57739 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CLDN2P57739 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CLDN2P57739 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLDN2P57739 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms