Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 TCAM1P-207ENST00000485295 1537 ntBASIC12.93□□□□□ -0.34
CLDN12P56749 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CLDN12P56749 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CLDN12P56749 NUTM2HP-201ENST00000442076 2498 ntBASIC12.93□□□□□ -0.34
CLDN12P56749 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN12P56749 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN12P56749 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN12P56749 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.92□□□□□ -0.34
CLDN12P56749 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN12P56749 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.92□□□□□ -0.34
CLDN12P56749 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC004835.2-201ENST00000603762 682 ntBASIC12.92□□□□□ -0.34
CLDN12P56749 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 SPDYE12P-201ENST00000618416 771 ntBASIC12.92□□□□□ -0.34
CLDN12P56749 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC011498.7-201ENST00000624986 2027 ntBASIC12.92□□□□□ -0.34
CLDN12P56749 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.92□□□□□ -0.34
CLDN12P56749 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.92□□□□□ -0.34
CLDN12P56749 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CLDN12P56749 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN12P56749 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 AC093525.8-201ENST00000624099 1342 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.91□□□□□ -0.34
CLDN12P56749 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN12P56749 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.91□□□□□ -0.34
CLDN12P56749 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.91□□□□□ -0.34
CLDN12P56749 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.91□□□□□ -0.34
CLDN12P56749 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 AC023141.5-201ENST00000458585 616 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 GAPDHP40-201ENST00000505218 1006 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 AP000344.2-201ENST00000512987 629 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 KRT18P58-201ENST00000527480 1120 ntBASIC12.91□□□□□ -0.34
CLDN12P56749 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CLDN12P56749 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CLDN12P56749 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms