Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 AC010141.1-201ENST00000411585 623 ntBASIC15.69■□□□□ 0.1
CACNA2D1P54289 AC006033.1-201ENST00000440505 426 ntBASIC15.69■□□□□ 0.1
CACNA2D1P54289 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 AC022494.1-201ENST00000466044 728 ntBASIC15.69■□□□□ 0.1
CACNA2D1P54289 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 AC009955.4-201ENST00000597192 544 ntBASIC15.69■□□□□ 0.1
CACNA2D1P54289 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CACNA2D1P54289 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.69■□□□□ 0.1
CACNA2D1P54289 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.69■□□□□ 0.1
CACNA2D1P54289 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SHC1P1-201ENST00000425230 1745 ntBASIC15.68■□□□□ 0.1
CACNA2D1P54289 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AC020907.1-201ENST00000616460 1350 ntBASIC15.68■□□□□ 0.1
CACNA2D1P54289 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 MIR1247-201ENST00000408206 136 ntBASIC15.68■□□□□ 0.1
CACNA2D1P54289 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 FAM8A2P-201ENST00000528813 1142 ntBASIC15.68■□□□□ 0.1
CACNA2D1P54289 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 AC244093.1-201ENST00000610837 814 ntBASIC15.68■□□□□ 0.1
CACNA2D1P54289 MIR6787-201ENST00000616675 61 ntBASIC15.68■□□□□ 0.1
CACNA2D1P54289 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.68■□□□□ 0.1
CACNA2D1P54289 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CACNA2D1P54289 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA2D1P54289 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA2D1P54289 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA2D1P54289 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.67■□□□□ 0.1
CACNA2D1P54289 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CACNA2D1P54289 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CACNA2D1P54289 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms