Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 AC011840.2-201ENST00000563063 1520 ntBASIC14.37□□□□□ -0.11
PDX1P52945 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.37□□□□□ -0.11
PDX1P52945 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PDX1P52945 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PDX1P52945 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 AC010141.1-201ENST00000411585 623 ntBASIC14.37□□□□□ -0.11
PDX1P52945 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.37□□□□□ -0.11
PDX1P52945 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.37□□□□□ -0.11
PDX1P52945 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.37□□□□□ -0.11
PDX1P52945 AC012618.1-201ENST00000461223 412 ntBASIC14.37□□□□□ -0.11
PDX1P52945 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.37□□□□□ -0.11
PDX1P52945 AL161670.2-201ENST00000557650 1227 ntBASIC14.37□□□□□ -0.11
PDX1P52945 PRKXP1-201ENST00000561423 1122 ntBASIC14.37□□□□□ -0.11
PDX1P52945 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 RN7SL163P-201ENST00000583100 276 ntBASIC14.37□□□□□ -0.11
PDX1P52945 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 AL805961.1-203ENST00000641078 1258 ntBASIC14.37□□□□□ -0.11
PDX1P52945 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 AL359258.3-201ENST00000622910 2331 ntBASIC14.37□□□□□ -0.11
PDX1P52945 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
PDX1P52945 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.37□□□□□ -0.11
PDX1P52945 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.37□□□□□ -0.11
PDX1P52945 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PDX1P52945 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 WASH3P-207ENST00000560956 1394 ntBASIC14.36□□□□□ -0.11
PDX1P52945 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.36□□□□□ -0.11
PDX1P52945 SHC1P1-201ENST00000425230 1745 ntBASIC14.36□□□□□ -0.11
PDX1P52945 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDX1P52945 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.36□□□□□ -0.11
PDX1P52945 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.36□□□□□ -0.11
PDX1P52945 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.36□□□□□ -0.11
PDX1P52945 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 AC125604.1-201ENST00000496255 707 ntBASIC14.36□□□□□ -0.11
PDX1P52945 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.36□□□□□ -0.11
PDX1P52945 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 AL160314.3-201ENST00000556041 767 ntBASIC14.36□□□□□ -0.11
PDX1P52945 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.36□□□□□ -0.11
PDX1P52945 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.36□□□□□ -0.11
PDX1P52945 MIR6727-201ENST00000620702 65 ntBASIC14.36□□□□□ -0.11
PDX1P52945 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PDX1P52945 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PDX1P52945 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.36□□□□□ -0.11
PDX1P52945 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.36□□□□□ -0.11
PDX1P52945 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PDX1P52945 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms