Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
USP11P51784 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.63■□□□□ 0.25
USP11P51784 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.63■□□□□ 0.25
USP11P51784 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.63■□□□□ 0.25
USP11P51784 RPL18P13-201ENST00000478088 569 ntBASIC16.63■□□□□ 0.25
USP11P51784 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
USP11P51784 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 RBM8B-201ENST00000555532 525 ntBASIC16.63■□□□□ 0.25
USP11P51784 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.63■□□□□ 0.25
USP11P51784 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.63■□□□□ 0.25
USP11P51784 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.63■□□□□ 0.25
USP11P51784 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.63■□□□□ 0.25
USP11P51784 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
USP11P51784 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.63■□□□□ 0.25
USP11P51784 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP11P51784 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.63■□□□□ 0.25
USP11P51784 AC144522.1-201ENST00000625111 1658 ntBASIC16.62■□□□□ 0.25
USP11P51784 AC007191.1-201ENST00000623179 2995 ntBASIC16.62■□□□□ 0.25
USP11P51784 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP11P51784 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.62■□□□□ 0.25
USP11P51784 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.62■□□□□ 0.25
USP11P51784 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 VDAC1P1-201ENST00000439229 848 ntBASIC16.62■□□□□ 0.25
USP11P51784 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.62■□□□□ 0.25
USP11P51784 HLA-J-204ENST00000495278 958 ntBASIC16.62■□□□□ 0.25
USP11P51784 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.62■□□□□ 0.25
USP11P51784 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.62■□□□□ 0.25
USP11P51784 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.62■□□□□ 0.25
USP11P51784 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 AC005962.1-201ENST00000584100 773 ntBASIC16.62■□□□□ 0.25
USP11P51784 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 AC068587.8-201ENST00000641239 219 ntBASIC16.62■□□□□ 0.25
USP11P51784 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.62■□□□□ 0.25
USP11P51784 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 AC005089.1-201ENST00000619486 2241 ntBASIC16.62■□□□□ 0.25
USP11P51784 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
USP11P51784 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP11P51784 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.62■□□□□ 0.25
USP11P51784 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP11P51784 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.61■□□□□ 0.25
USP11P51784 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 MBLAC2-202ENST00000514906 1936 ntBASIC16.61■□□□□ 0.25
USP11P51784 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.61■□□□□ 0.25
USP11P51784 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP11P51784 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms