Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 RN7SKP230-201ENST00000365642 335 ntBASIC15.62■□□□□ 0.09
TUBP50607 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TUBP50607 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TUBP50607 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TUBP50607 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.62■□□□□ 0.09
TUBP50607 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.62■□□□□ 0.09
TUBP50607 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBP50607 AP001002.3-201ENST00000623482 206 ntBASIC15.62■□□□□ 0.09
TUBP50607 AL161772.1-201ENST00000610494 4412 ntBASIC15.62■□□□□ 0.09
TUBP50607 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.62■□□□□ 0.09
TUBP50607 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TUBP50607 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 AC011840.2-201ENST00000563063 1520 ntBASIC15.62■□□□□ 0.09
TUBP50607 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
TUBP50607 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.62■□□□□ 0.09
TUBP50607 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TUBP50607 AC126755.1-201ENST00000525846 6405 ntBASIC15.62■□□□□ 0.09
TUBP50607 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.61■□□□□ 0.09
TUBP50607 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.61■□□□□ 0.09
TUBP50607 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.61■□□□□ 0.09
TUBP50607 MIR1247-201ENST00000408206 136 ntBASIC15.61■□□□□ 0.09
TUBP50607 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.61■□□□□ 0.09
TUBP50607 AC104306.2-201ENST00000451877 341 ntBASIC15.61■□□□□ 0.09
TUBP50607 KRT8P13-201ENST00000463294 1010 ntBASIC15.61■□□□□ 0.09
TUBP50607 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 ALG3P1-201ENST00000508806 1114 ntBASIC15.61■□□□□ 0.09
TUBP50607 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.61■□□□□ 0.09
TUBP50607 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 AC243960.2-201ENST00000600996 747 ntBASIC15.61■□□□□ 0.09
TUBP50607 AL118558.3-201ENST00000607414 1079 ntBASIC15.61■□□□□ 0.09
TUBP50607 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 AC002472.3-201ENST00000640124 621 ntBASIC15.61■□□□□ 0.09
TUBP50607 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TUBP50607 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
TUBP50607 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.61■□□□□ 0.09
TUBP50607 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TUBP50607 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.6■□□□□ 0.09
TUBP50607 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 AC003102.2-201ENST00000589195 1469 ntBASIC15.6■□□□□ 0.09
TUBP50607 AL390755.1-201ENST00000623716 2027 ntBASIC15.6■□□□□ 0.09
TUBP50607 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.6■□□□□ 0.09
TUBP50607 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TUBP50607 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TUBP50607 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms