Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 VDAC1P1-201ENST00000439229 848 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 AC021723.1-201ENST00000486306 515 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD4P46934 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
NEDD4P46934 EMC4-209ENST00000559421 497 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD4P46934 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.31■□□□□ 0.36
NEDD4P46934 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD4P46934 BNIP3P13-201ENST00000599968 566 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 AC243960.2-201ENST00000600996 747 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NEDD4P46934 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.31■□□□□ 0.36
NEDD4P46934 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NEDD4P46934 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 CYP4F23P-201ENST00000593402 1579 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 AC012617.1-204ENST00000586340 2305 ntBASIC17.31■□□□□ 0.36
NEDD4P46934 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NEDD4P46934 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.3■□□□□ 0.36
NEDD4P46934 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NEDD4P46934 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.3■□□□□ 0.36
NEDD4P46934 AC006122.1-201ENST00000493323 440 ntBASIC17.3■□□□□ 0.36
NEDD4P46934 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 AC044849.1-201ENST00000519737 1188 ntBASIC17.3■□□□□ 0.36
NEDD4P46934 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.3■□□□□ 0.36
NEDD4P46934 AL160314.3-201ENST00000556041 767 ntBASIC17.3■□□□□ 0.36
NEDD4P46934 AC005324.6-201ENST00000587972 613 ntBASIC17.3■□□□□ 0.36
NEDD4P46934 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.3■□□□□ 0.36
NEDD4P46934 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NEDD4P46934 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.3■□□□□ 0.36
NEDD4P46934 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.3■□□□□ 0.36
NEDD4P46934 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NEDD4P46934 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.3■□□□□ 0.36
NEDD4P46934 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 AC004899.1-201ENST00000424687 1714 ntBASIC17.3■□□□□ 0.36
NEDD4P46934 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.3■□□□□ 0.36
NEDD4P46934 AC041040.2-201ENST00000622926 2899 ntBASIC17.3■□□□□ 0.36
NEDD4P46934 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NEDD4P46934 AC136759.1-202ENST00000530858 2194 ntBASIC17.29■□□□□ 0.36
NEDD4P46934 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NEDD4P46934 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEDD4P46934 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.29■□□□□ 0.36
NEDD4P46934 AC006033.1-201ENST00000440505 426 ntBASIC17.29■□□□□ 0.36
NEDD4P46934 RPL18P13-201ENST00000478088 569 ntBASIC17.29■□□□□ 0.36
NEDD4P46934 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.29■□□□□ 0.36
NEDD4P46934 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD4P46934 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD4P46934 MIR6799-201ENST00000620297 69 ntBASIC17.29■□□□□ 0.36
NEDD4P46934 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
NEDD4P46934 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NEDD4P46934 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD4P46934 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NEDD4P46934 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NEDD4P46934 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.29■□□□□ 0.36
NEDD4P46934 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms