Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HNF4AP41235 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
HNF4AP41235 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HNF4AP41235 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HNF4AP41235 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.41□□□□□ -0.1
HNF4AP41235 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.41□□□□□ -0.1
HNF4AP41235 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.41□□□□□ -0.1
HNF4AP41235 CR383656.12-201ENST00000549567 513 ntBASIC14.41□□□□□ -0.1
HNF4AP41235 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC14.41□□□□□ -0.1
HNF4AP41235 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 RN7SL48P-201ENST00000579283 293 ntBASIC14.41□□□□□ -0.1
HNF4AP41235 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 AC004466.1-201ENST00000599515 1080 ntBASIC14.41□□□□□ -0.1
HNF4AP41235 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.41□□□□□ -0.1
HNF4AP41235 AL022328.1-201ENST00000610050 478 ntBASIC14.41□□□□□ -0.1
HNF4AP41235 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.41□□□□□ -0.1
HNF4AP41235 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 AC092135.3-201ENST00000624151 1846 ntBASIC14.41□□□□□ -0.1
HNF4AP41235 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HNF4AP41235 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HNF4AP41235 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.41□□□□□ -0.1
HNF4AP41235 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HNF4AP41235 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 MESTP3-201ENST00000503460 968 ntBASIC14.4□□□□□ -0.1
HNF4AP41235 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.4□□□□□ -0.1
HNF4AP41235 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
HNF4AP41235 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
HNF4AP41235 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 AC005840.4-201ENST00000541242 2494 ntBASIC14.4□□□□□ -0.1
HNF4AP41235 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HNF4AP41235 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HNF4AP41235 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.4□□□□□ -0.1
HNF4AP41235 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.11
HNF4AP41235 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HNF4AP41235 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.39□□□□□ -0.11
HNF4AP41235 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HNF4AP41235 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms