Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 AC011840.2-201ENST00000563063 1520 ntBASIC14.05□□□□□ -0.16
PTPN6P29350 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
PTPN6P29350 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
PTPN6P29350 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.05□□□□□ -0.16
PTPN6P29350 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 AC007969.1-201ENST00000433675 447 ntBASIC14.05□□□□□ -0.16
PTPN6P29350 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.05□□□□□ -0.16
PTPN6P29350 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
PTPN6P29350 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.05□□□□□ -0.16
PTPN6P29350 AC008735.3-201ENST00000596646 500 ntBASIC14.05□□□□□ -0.16
PTPN6P29350 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.05□□□□□ -0.16
PTPN6P29350 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.05□□□□□ -0.16
PTPN6P29350 AC005252.2-201ENST00000624630 1141 ntBASIC14.05□□□□□ -0.16
PTPN6P29350 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.05□□□□□ -0.16
PTPN6P29350 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.05□□□□□ -0.16
PTPN6P29350 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PTPN6P29350 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.05□□□□□ -0.16
PTPN6P29350 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.04□□□□□ -0.16
PTPN6P29350 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PTPN6P29350 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 RN7SKP230-201ENST00000365642 335 ntBASIC14.04□□□□□ -0.16
PTPN6P29350 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 TDH-203ENST00000531764 1110 ntBASIC14.04□□□□□ -0.16
PTPN6P29350 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.04□□□□□ -0.16
PTPN6P29350 AP001063.1-201ENST00000568332 529 ntBASIC14.04□□□□□ -0.16
PTPN6P29350 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.04□□□□□ -0.16
PTPN6P29350 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.04□□□□□ -0.16
PTPN6P29350 MIR6074-201ENST00000612054 107 ntBASIC14.04□□□□□ -0.16
PTPN6P29350 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
PTPN6P29350 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.04□□□□□ -0.16
PTPN6P29350 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 TCAM1P-207ENST00000485295 1537 ntBASIC14.04□□□□□ -0.16
PTPN6P29350 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.04□□□□□ -0.16
PTPN6P29350 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
PTPN6P29350 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms