Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.41□□□□□ -0.26
GDF1P27539 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.41□□□□□ -0.26
GDF1P27539 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.41□□□□□ -0.26
GDF1P27539 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 AL035414.1-201ENST00000451327 857 ntBASIC13.41□□□□□ -0.26
GDF1P27539 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.41□□□□□ -0.26
GDF1P27539 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 AC138649.2-201ENST00000615886 705 ntBASIC13.41□□□□□ -0.26
GDF1P27539 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
GDF1P27539 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 AC013726.1-201ENST00000563747 2285 ntBASIC13.41□□□□□ -0.26
GDF1P27539 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
GDF1P27539 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
GDF1P27539 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
GDF1P27539 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 BCYRN1-201ENST00000418539 200 ntBASIC13.4□□□□□ -0.26
GDF1P27539 CICP12-201ENST00000455801 843 ntBASIC13.4□□□□□ -0.26
GDF1P27539 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.4□□□□□ -0.26
GDF1P27539 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.4□□□□□ -0.26
GDF1P27539 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.4□□□□□ -0.26
GDF1P27539 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.4□□□□□ -0.26
GDF1P27539 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.4□□□□□ -0.26
GDF1P27539 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
GDF1P27539 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 AC138028.6-201ENST00000616106 1482 ntBASIC13.4□□□□□ -0.26
GDF1P27539 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 AC244394.1-201ENST00000435000 1665 ntBASIC13.4□□□□□ -0.26
GDF1P27539 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
GDF1P27539 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
GDF1P27539 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
GDF1P27539 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.39□□□□□ -0.27
GDF1P27539 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
GDF1P27539 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms