Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 KRT18P35-201ENST00000510488 1269 ntBASIC12.59□□□□□ -0.39
VAMP1P23763 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.59□□□□□ -0.39
VAMP1P23763 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 AC010326.4-201ENST00000604665 891 ntBASIC12.59□□□□□ -0.39
VAMP1P23763 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 AC064836.3-201ENST00000607928 673 ntBASIC12.59□□□□□ -0.39
VAMP1P23763 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
VAMP1P23763 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
VAMP1P23763 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 AC015909.5-201ENST00000624336 2266 ntBASIC12.59□□□□□ -0.39
VAMP1P23763 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
VAMP1P23763 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
VAMP1P23763 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.59□□□□□ -0.39
VAMP1P23763 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
VAMP1P23763 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
VAMP1P23763 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
VAMP1P23763 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
VAMP1P23763 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.58□□□□□ -0.39
VAMP1P23763 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
VAMP1P23763 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.58□□□□□ -0.39
VAMP1P23763 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 TCAM1P-207ENST00000485295 1537 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.58□□□□□ -0.4
VAMP1P23763 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
VAMP1P23763 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
VAMP1P23763 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
VAMP1P23763 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 FAM86C2P-203ENST00000528684 1004 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.58□□□□□ -0.4
VAMP1P23763 AC023794.5-201ENST00000564380 2157 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 AC106730.1-201ENST00000566722 1090 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.58□□□□□ -0.4
VAMP1P23763 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.58□□□□□ -0.4
VAMP1P23763 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.58□□□□□ -0.4
VAMP1P23763 Z83851.2-201ENST00000609564 659 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 AP3S2-216ENST00000617003 1561 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.58□□□□□ -0.4
VAMP1P23763 AC012313.10-201ENST00000623509 926 ntBASIC12.58□□□□□ -0.4
VAMP1P23763 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
VAMP1P23763 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
VAMP1P23763 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms