Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH3P22223 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH3P22223 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 AHCYP2-201ENST00000430630 1300 ntBASIC14.61□□□□□ -0.07
CDH3P22223 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH3P22223 AL360270.3-201ENST00000609118 1348 ntBASIC14.61□□□□□ -0.07
CDH3P22223 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH3P22223 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH3P22223 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH3P22223 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 AC006001.1-201ENST00000325130 474 ntBASIC14.6□□□□□ -0.07
CDH3P22223 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CDH3P22223 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH3P22223 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.6□□□□□ -0.07
CDH3P22223 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH3P22223 RNA5SP412-201ENST00000516234 123 ntBASIC14.6□□□□□ -0.07
CDH3P22223 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.6□□□□□ -0.07
CDH3P22223 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 AC006453.4-201ENST00000636949 1252 ntBASIC14.6□□□□□ -0.07
CDH3P22223 AC008687.7-202ENST00000637404 953 ntBASIC14.6□□□□□ -0.07
CDH3P22223 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.6□□□□□ -0.07
CDH3P22223 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CDH3P22223 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CDH3P22223 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 AC138969.2-201ENST00000532739 9932 ntBASIC14.59□□□□□ -0.07
CDH3P22223 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.59□□□□□ -0.07
CDH3P22223 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CDH3P22223 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH3P22223 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.59□□□□□ -0.07
CDH3P22223 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.59□□□□□ -0.07
CDH3P22223 AC245100.3-201ENST00000441281 285 ntBASIC14.59□□□□□ -0.07
CDH3P22223 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms