Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 C2orf27AP3-201ENST00000434123 579 ntBASIC15.4■□□□□ 0.06
TCF4P15884 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 AC007551.1-201ENST00000457394 519 ntBASIC15.4■□□□□ 0.06
TCF4P15884 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.4■□□□□ 0.06
TCF4P15884 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 AL354718.3-201ENST00000616414 581 ntBASIC15.4■□□□□ 0.06
TCF4P15884 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.4■□□□□ 0.06
TCF4P15884 AC138951.2-201ENST00000623455 1161 ntBASIC15.4■□□□□ 0.06
TCF4P15884 CR382287.1-201ENST00000623954 586 ntBASIC15.4■□□□□ 0.06
TCF4P15884 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TCF4P15884 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TCF4P15884 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TCF4P15884 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TCF4P15884 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.4■□□□□ 0.06
TCF4P15884 AL161772.1-201ENST00000610494 4412 ntBASIC15.4■□□□□ 0.06
TCF4P15884 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.39■□□□□ 0.05
TCF4P15884 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TCF4P15884 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.39■□□□□ 0.05
TCF4P15884 HSPA8P5-201ENST00000456928 2069 ntBASIC15.39■□□□□ 0.05
TCF4P15884 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.39■□□□□ 0.05
TCF4P15884 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.39■□□□□ 0.05
TCF4P15884 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TCF4P15884 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TCF4P15884 AC016694.1-201ENST00000434179 700 ntBASIC15.39■□□□□ 0.05
TCF4P15884 FAM8A4P-201ENST00000435433 1213 ntBASIC15.39■□□□□ 0.05
TCF4P15884 PUDPP3-201ENST00000445368 636 ntBASIC15.39■□□□□ 0.05
TCF4P15884 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.39■□□□□ 0.05
TCF4P15884 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.39■□□□□ 0.05
TCF4P15884 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.39■□□□□ 0.05
TCF4P15884 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.39■□□□□ 0.05
TCF4P15884 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.39■□□□□ 0.05
TCF4P15884 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
TCF4P15884 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.39■□□□□ 0.05
TCF4P15884 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.39■□□□□ 0.05
TCF4P15884 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
TCF4P15884 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TCF4P15884 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.39■□□□□ 0.05
TCF4P15884 AC020910.6-201ENST00000623084 1459 ntBASIC15.39■□□□□ 0.05
TCF4P15884 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TCF4P15884 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
TCF4P15884 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
TCF4P15884 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TCF4P15884 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
TCF4P15884 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.38■□□□□ 0.05
TCF4P15884 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TCF4P15884 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms