Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.03■□□□□ 0.64
MS4A1P11836 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A1P11836 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
MS4A1P11836 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
MS4A1P11836 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC19.02■□□□□ 0.64
MS4A1P11836 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC19.02■□□□□ 0.64
MS4A1P11836 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 POM121L8P-201ENST00000417732 1281 ntBASIC19.02■□□□□ 0.64
MS4A1P11836 POM121L9P-203ENST00000441984 1285 ntBASIC19.02■□□□□ 0.64
MS4A1P11836 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.02■□□□□ 0.64
MS4A1P11836 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.02■□□□□ 0.64
MS4A1P11836 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.02■□□□□ 0.64
MS4A1P11836 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.02■□□□□ 0.64
MS4A1P11836 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.02■□□□□ 0.64
MS4A1P11836 AC138696.2-201ENST00000607376 223 ntBASIC19.02■□□□□ 0.64
MS4A1P11836 AC132938.4-201ENST00000623835 848 ntBASIC19.02■□□□□ 0.64
MS4A1P11836 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MS4A1P11836 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MS4A1P11836 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MS4A1P11836 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC19.02■□□□□ 0.63
MS4A1P11836 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
MS4A1P11836 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
MS4A1P11836 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MS4A1P11836 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MS4A1P11836 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MS4A1P11836 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 FTLP10-202ENST00000505798 471 ntBASIC19.01■□□□□ 0.63
MS4A1P11836 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC19.01■□□□□ 0.63
MS4A1P11836 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC19.01■□□□□ 0.63
MS4A1P11836 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MS4A1P11836 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MS4A1P11836 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MS4A1P11836 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MS4A1P11836 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MS4A1P11836 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
MS4A1P11836 RDX-218ENST00000544551 4117 ntTSL 2 BASIC19.01■□□□□ 0.63
MS4A1P11836 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
MS4A1P11836 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 CLUHP2-201ENST00000426660 1303 ntBASIC19■□□□□ 0.63
MS4A1P11836 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
MS4A1P11836 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19■□□□□ 0.63
MS4A1P11836 AC015818.8-201ENST00000587907 1519 ntBASIC19■□□□□ 0.63
MS4A1P11836 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC19■□□□□ 0.63
MS4A1P11836 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
MS4A1P11836 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19■□□□□ 0.63
MS4A1P11836 RN7SKP230-201ENST00000365642 335 ntBASIC19■□□□□ 0.63
MS4A1P11836 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19■□□□□ 0.63
MS4A1P11836 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19■□□□□ 0.63
MS4A1P11836 GCOM2-201ENST00000509133 1104 ntBASIC19■□□□□ 0.63
MS4A1P11836 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19■□□□□ 0.63
MS4A1P11836 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19■□□□□ 0.63
MS4A1P11836 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19■□□□□ 0.63
MS4A1P11836 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19■□□□□ 0.63
MS4A1P11836 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms