Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AC140113.2-201ENST00000604370 208 ntBASIC11.12□□□□□ -0.63
SMIM17P0DL12 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AL645728.2-202ENST00000641679 227 ntBASIC11.12□□□□□ -0.63
SMIM17P0DL12 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 MST1P2-201ENST00000457982 2291 ntBASIC11.12□□□□□ -0.63
SMIM17P0DL12 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AL035456.1-201ENST00000456064 1369 ntBASIC11.12□□□□□ -0.63
SMIM17P0DL12 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SMIM17P0DL12 AP001267.2-201ENST00000532619 2086 ntBASIC11.12□□□□□ -0.63
SMIM17P0DL12 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SMIM17P0DL12 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 IL9RP2-201ENST00000423948 1312 ntBASIC11.11□□□□□ -0.63
SMIM17P0DL12 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.11□□□□□ -0.63
SMIM17P0DL12 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 AL590627.1-203ENST00000421194 1026 ntBASIC11.11□□□□□ -0.63
SMIM17P0DL12 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 KRT18P32-201ENST00000424695 1287 ntBASIC11.11□□□□□ -0.63
SMIM17P0DL12 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 SERBP1P3-201ENST00000459980 809 ntBASIC11.11□□□□□ -0.63
SMIM17P0DL12 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 RPL18-209ENST00000550645 463 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 RPL18-214ENST00000552588 559 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 REXO1L4P-201ENST00000605109 1937 ntBASIC11.11□□□□□ -0.63
SMIM17P0DL12 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
SMIM17P0DL12 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC11.11□□□□□ -0.63
SMIM17P0DL12 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms