Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 NUTM2HP-201ENST00000442076 2498 ntBASIC14.04□□□□□ -0.16
MT-ND1P03886 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.04□□□□□ -0.16
MT-ND1P03886 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
MT-ND1P03886 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
MT-ND1P03886 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.03□□□□□ -0.16
MT-ND1P03886 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
MT-ND1P03886 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 AC107890.1-201ENST00000422478 521 ntBASIC14.03□□□□□ -0.16
MT-ND1P03886 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.03□□□□□ -0.16
MT-ND1P03886 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.03□□□□□ -0.16
MT-ND1P03886 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.03□□□□□ -0.16
MT-ND1P03886 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
MT-ND1P03886 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 KRT8P14-201ENST00000414254 1442 ntBASIC14.03□□□□□ -0.16
MT-ND1P03886 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.03□□□□□ -0.16
MT-ND1P03886 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.03□□□□□ -0.16
MT-ND1P03886 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.03□□□□□ -0.16
MT-ND1P03886 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MT-ND1P03886 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.03□□□□□ -0.16
MT-ND1P03886 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
MT-ND1P03886 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.02□□□□□ -0.16
MT-ND1P03886 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
MT-ND1P03886 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.02□□□□□ -0.16
MT-ND1P03886 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
MT-ND1P03886 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MT-ND1P03886 AC020910.6-201ENST00000623084 1459 ntBASIC14.02□□□□□ -0.16
MT-ND1P03886 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.02□□□□□ -0.17
MT-ND1P03886 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MT-ND1P03886 MIR1233-2-201ENST00000408138 82 ntBASIC14.02□□□□□ -0.17
MT-ND1P03886 MIR1233-1-201ENST00000408722 82 ntBASIC14.02□□□□□ -0.17
MT-ND1P03886 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.02□□□□□ -0.17
MT-ND1P03886 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.02□□□□□ -0.17
MT-ND1P03886 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.02□□□□□ -0.17
MT-ND1P03886 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.02□□□□□ -0.17
MT-ND1P03886 AC067863.1-201ENST00000494933 530 ntBASIC14.02□□□□□ -0.17
MT-ND1P03886 AC004066.1-201ENST00000502488 802 ntBASIC14.02□□□□□ -0.17
MT-ND1P03886 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.02□□□□□ -0.17
MT-ND1P03886 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.02□□□□□ -0.17
MT-ND1P03886 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MT-ND1P03886 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.02□□□□□ -0.17
MT-ND1P03886 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.02□□□□□ -0.17
MT-ND1P03886 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.02□□□□□ -0.17
MT-ND1P03886 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MT-ND1P03886 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MT-ND1P03886 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms