Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 LINC00528-201ENST00000600723 2160 ntBASIC15.92■□□□□ 0.14
CHRNA1P02708 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
CHRNA1P02708 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CHRNA1P02708 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 FTH1P22-201ENST00000456305 520 ntBASIC15.92■□□□□ 0.14
CHRNA1P02708 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.92■□□□□ 0.14
CHRNA1P02708 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CHRNA1P02708 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHRNA1P02708 AC006486.2-201ENST00000624246 2199 ntBASIC15.92■□□□□ 0.14
CHRNA1P02708 AP002353.1-201ENST00000528257 1599 ntBASIC15.92■□□□□ 0.14
CHRNA1P02708 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.92■□□□□ 0.14
CHRNA1P02708 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.91■□□□□ 0.14
CHRNA1P02708 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHRNA1P02708 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CHRNA1P02708 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.91■□□□□ 0.14
CHRNA1P02708 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 CHCHD2P9-201ENST00000461726 456 ntBASIC15.91■□□□□ 0.14
CHRNA1P02708 MRPL22P1-201ENST00000505398 616 ntBASIC15.91■□□□□ 0.14
CHRNA1P02708 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 AC084781.1-201ENST00000613737 656 ntBASIC15.91■□□□□ 0.14
CHRNA1P02708 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CHRNA1P02708 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CHRNA1P02708 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.91■□□□□ 0.14
CHRNA1P02708 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 AC018442.1-201ENST00000421439 2061 ntBASIC15.91■□□□□ 0.14
CHRNA1P02708 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CHRNA1P02708 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CHRNA1P02708 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA1P02708 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 KRT17P5-201ENST00000332088 839 ntBASIC15.9■□□□□ 0.14
CHRNA1P02708 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CHRNA1P02708 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA1P02708 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CHRNA1P02708 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.9■□□□□ 0.14
CHRNA1P02708 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms