Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
APOA1P02647 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
APOA1P02647 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.25□□□□□ -0.29
APOA1P02647 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.25□□□□□ -0.29
APOA1P02647 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.25□□□□□ -0.29
APOA1P02647 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.25□□□□□ -0.29
APOA1P02647 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.25□□□□□ -0.29
APOA1P02647 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.25□□□□□ -0.29
APOA1P02647 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.25□□□□□ -0.29
APOA1P02647 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.25□□□□□ -0.29
APOA1P02647 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 AP002761.4-201ENST00000565433 3361 ntBASIC13.25□□□□□ -0.29
APOA1P02647 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.25□□□□□ -0.29
APOA1P02647 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.25□□□□□ -0.29
APOA1P02647 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOA1P02647 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
APOA1P02647 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 AC111170.3-201ENST00000624282 2464 ntBASIC13.24□□□□□ -0.29
APOA1P02647 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
APOA1P02647 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 ANKRD36B-204ENST00000438709 6067 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOA1P02647 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.24□□□□□ -0.29
APOA1P02647 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.24□□□□□ -0.29
APOA1P02647 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.24□□□□□ -0.29
APOA1P02647 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.24□□□□□ -0.29
APOA1P02647 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOA1P02647 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms