Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRIM3O75382 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
TRIM3O75382 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
TRIM3O75382 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 HLA-K-203ENST00000430151 1046 ntBASIC13.89□□□□□ -0.19
TRIM3O75382 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM3O75382 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM3O75382 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM3O75382 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.89□□□□□ -0.19
TRIM3O75382 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 AL603764.1-201ENST00000636452 321 ntBASIC13.89□□□□□ -0.19
TRIM3O75382 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.89□□□□□ -0.19
TRIM3O75382 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 AC007686.3-201ENST00000619017 3487 ntBASIC13.89□□□□□ -0.19
TRIM3O75382 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRIM3O75382 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRIM3O75382 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.89□□□□□ -0.19
TRIM3O75382 TCAF1P1-201ENST00000414990 2232 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 REXO1L4P-201ENST00000605109 1937 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 AC012508.2-201ENST00000567613 1472 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM3O75382 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM3O75382 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM3O75382 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 FO681548.1-201ENST00000455617 1132 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 AC022616.1-201ENST00000518688 554 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM3O75382 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM3O75382 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.88□□□□□ -0.19
TRIM3O75382 RN7SL48P-201ENST00000579283 293 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 RHOXF1P1-202ENST00000635473 501 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRIM3O75382 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 CICP20-201ENST00000443330 2801 ntBASIC13.88□□□□□ -0.19
TRIM3O75382 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.88□□□□□ -0.19
TRIM3O75382 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRIM3O75382 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms