Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CPNE3O75131 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
CPNE3O75131 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
CPNE3O75131 AL136309.1-201ENST00000403917 691 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.3□□□□□ -0.12
CPNE3O75131 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 AC091804.1-201ENST00000486888 567 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 MESTP3-201ENST00000503460 968 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 ZNF767P-206ENST00000513792 565 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPNE3O75131 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.3□□□□□ -0.12
CPNE3O75131 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 REXO1L4P-201ENST00000605109 1937 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE3O75131 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 AL157414.3-201ENST00000624276 1954 ntBASIC14.3□□□□□ -0.12
CPNE3O75131 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE3O75131 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.3□□□□□ -0.12
CPNE3O75131 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPNE3O75131 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CPNE3O75131 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.3□□□□□ -0.12
CPNE3O75131 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.29□□□□□ -0.12
CPNE3O75131 AC026434.2-201ENST00000506094 1078 ntBASIC14.29□□□□□ -0.12
CPNE3O75131 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.29□□□□□ -0.12
CPNE3O75131 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.29□□□□□ -0.12
CPNE3O75131 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 AC020914.3-201ENST00000594712 304 ntBASIC14.29□□□□□ -0.12
CPNE3O75131 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 AL139099.5-201ENST00000635274 300 ntBASIC14.29□□□□□ -0.12
CPNE3O75131 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
CPNE3O75131 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CPNE3O75131 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPNE3O75131 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms