Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
OPHN1O60890 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
OPHN1O60890 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 AL137784.3-201ENST00000623858 2288 ntBASIC15.54■□□□□ 0.08
OPHN1O60890 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
OPHN1O60890 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 AC134312.5-201ENST00000568031 1313 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.53■□□□□ 0.08
OPHN1O60890 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 RPL13AP20-201ENST00000459725 609 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 KRT8P13-201ENST00000463294 1010 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.53■□□□□ 0.08
OPHN1O60890 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.53■□□□□ 0.08
OPHN1O60890 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 AC009542.2-202ENST00000619004 1067 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 RHOXF1P1-202ENST00000635473 501 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 PRSS30P-206ENST00000641773 873 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
OPHN1O60890 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
OPHN1O60890 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.53■□□□□ 0.08
OPHN1O60890 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 MTHFR-210ENST00000641407 2387 ntBASIC15.53■□□□□ 0.08
OPHN1O60890 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
OPHN1O60890 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.53■□□□□ 0.08
OPHN1O60890 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
OPHN1O60890 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
OPHN1O60890 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.52■□□□□ 0.08
OPHN1O60890 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
OPHN1O60890 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.52■□□□□ 0.08
OPHN1O60890 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.52■□□□□ 0.08
OPHN1O60890 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.52■□□□□ 0.08
OPHN1O60890 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.52■□□□□ 0.08
OPHN1O60890 BX539320.1-201ENST00000623759 877 ntBASIC15.52■□□□□ 0.08
OPHN1O60890 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.52■□□□□ 0.08
OPHN1O60890 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.52■□□□□ 0.08
OPHN1O60890 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
OPHN1O60890 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms