Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AL008718.2-201ENST00000609206 1313 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AC018735.1-201ENST00000437208 1502 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 PFN1P12-201ENST00000455938 534 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AC021723.1-201ENST00000486306 515 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 AC009884.2-201ENST00000603110 324 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 AL023803.2-201ENST00000620080 638 ntBASIC14.93□□□□□ -0.02
PRAMEF11O60813 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PRAMEF11O60813 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.93□□□□□ -0.02
PRAMEF11O60813 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC007191.1-201ENST00000623179 2995 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC090505.1-201ENST00000430515 1834 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC108725.1-201ENST00000495472 409 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC005324.6-201ENST00000587972 613 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC007663.3-201ENST00000609632 465 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC022748.3-201ENST00000621828 275 ntBASIC14.92□□□□□ -0.02
PRAMEF11O60813 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
PRAMEF11O60813 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms