Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16■□□□□ 0.15
EXTL3O43909 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 AC244394.1-201ENST00000435000 1665 ntBASIC15.99■□□□□ 0.15
EXTL3O43909 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
EXTL3O43909 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 FAM58BP-201ENST00000439056 645 ntBASIC15.99■□□□□ 0.15
EXTL3O43909 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.99■□□□□ 0.15
EXTL3O43909 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 AC103810.3-201ENST00000583567 96 ntBASIC15.99■□□□□ 0.15
EXTL3O43909 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.99■□□□□ 0.15
EXTL3O43909 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 MIR6720-201ENST00000611664 98 ntBASIC15.99■□□□□ 0.15
EXTL3O43909 MIR6074-201ENST00000612054 107 ntBASIC15.99■□□□□ 0.15
EXTL3O43909 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.99■□□□□ 0.15
EXTL3O43909 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.99■□□□□ 0.15
EXTL3O43909 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.99■□□□□ 0.15
EXTL3O43909 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
EXTL3O43909 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
EXTL3O43909 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
EXTL3O43909 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.98■□□□□ 0.15
EXTL3O43909 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.98■□□□□ 0.15
EXTL3O43909 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.98■□□□□ 0.15
EXTL3O43909 AC091271.1-201ENST00000611877 1162 ntBASIC15.98■□□□□ 0.15
EXTL3O43909 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.98■□□□□ 0.15
EXTL3O43909 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
EXTL3O43909 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
EXTL3O43909 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.98■□□□□ 0.15
EXTL3O43909 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
EXTL3O43909 BX640514.1-201ENST00000583223 1918 ntBASIC15.98■□□□□ 0.15
EXTL3O43909 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.98■□□□□ 0.15
EXTL3O43909 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms