Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 TUBBP5-203ENST00000508529 1334 ntBASIC14.87□□□□□ -0.03
SMAD6O43541 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.87□□□□□ -0.03
SMAD6O43541 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
SMAD6O43541 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SMAD6O43541 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SMAD6O43541 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC14.86□□□□□ -0.03
SMAD6O43541 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 AC009093.10-201ENST00000641956 1442 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SMAD6O43541 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 BCYRN1-201ENST00000418539 200 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.86□□□□□ -0.03
SMAD6O43541 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.86□□□□□ -0.03
SMAD6O43541 MARK2P5-201ENST00000507649 634 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 RBM8B-201ENST00000555532 525 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.86□□□□□ -0.03
SMAD6O43541 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 NDUFV2P1-201ENST00000596415 907 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 AC026740.1-201ENST00000607068 791 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 AP000346.4-201ENST00000614827 381 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.86□□□□□ -0.03
SMAD6O43541 AGGF1P1-201ENST00000509500 2073 ntBASIC14.86□□□□□ -0.03
SMAD6O43541 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SMAD6O43541 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SMAD6O43541 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SMAD6O43541 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 AC015656.1-201ENST00000624209 3578 ntBASIC14.85□□□□□ -0.03
SMAD6O43541 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SMAD6O43541 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
SMAD6O43541 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SMAD6O43541 CYP46A4P-201ENST00000414953 267 ntBASIC14.85□□□□□ -0.03
SMAD6O43541 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SMAD6O43541 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.85□□□□□ -0.03
SMAD6O43541 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.85□□□□□ -0.03
SMAD6O43541 AC009779.1-201ENST00000551138 283 ntBASIC14.85□□□□□ -0.03
SMAD6O43541 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 2341.8 ms