Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 AC103702.1-201ENST00000548801 2630 ntBASIC15.55■□□□□ 0.08
CLDN5O00501 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLDN5O00501 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLDN5O00501 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.55■□□□□ 0.08
CLDN5O00501 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 KHSRPP1-201ENST00000427983 1768 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN5O00501 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 AL161772.1-201ENST00000610494 4412 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 AC097359.2-201ENST00000604992 2389 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN5O00501 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CLDN5O00501 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN5O00501 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 VDAC1P1-201ENST00000439229 848 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN5O00501 AC012441.2-201ENST00000444843 739 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.54■□□□□ 0.08
CLDN5O00501 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 AC091804.1-201ENST00000486888 567 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 AC005740.2-201ENST00000511085 419 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 SCARNA21-201ENST00000517026 139 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.54■□□□□ 0.08
CLDN5O00501 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 AL160314.3-201ENST00000556041 767 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.54■□□□□ 0.08
CLDN5O00501 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN5O00501 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.54■□□□□ 0.08
CLDN5O00501 AC068587.8-201ENST00000641239 219 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CLDN5O00501 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLDN5O00501 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLDN5O00501 AC140479.7-201ENST00000636301 2332 ntBASIC15.54■□□□□ 0.08
CLDN5O00501 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.54■□□□□ 0.08
CLDN5O00501 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.53■□□□□ 0.08
CLDN5O00501 AP001267.2-201ENST00000532619 2086 ntBASIC15.53■□□□□ 0.08
CLDN5O00501 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLDN5O00501 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN5O00501 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN5O00501 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
CLDN5O00501 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN5O00501 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLDN5O00501 AC113367.3-201ENST00000508316 1912 ntBASIC15.53■□□□□ 0.08
CLDN5O00501 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN5O00501 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN5O00501 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CLDN5O00501 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN5O00501 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.53■□□□□ 0.08
CLDN5O00501 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 HIST2H2BC-201ENST00000498492 580 ntBASIC15.53■□□□□ 0.08
CLDN5O00501 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.53■□□□□ 0.08
CLDN5O00501 RN7SL163P-201ENST00000583100 276 ntBASIC15.53■□□□□ 0.08
CLDN5O00501 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.53■□□□□ 0.08
CLDN5O00501 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CLDN5O00501 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CLDN5O00501 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLDN5O00501 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms