Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 AC021305.1-201ENST00000520656 1514 ntBASIC19.2■□□□□ 0.66
PIK3C2AO00443 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 FUCA1P1-201ENST00000374476 1351 ntBASIC19.2■□□□□ 0.66
PIK3C2AO00443 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 AC092573.1-201ENST00000433054 884 ntBASIC19.2■□□□□ 0.66
PIK3C2AO00443 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 KRT18P37-201ENST00000520711 1282 ntBASIC19.2■□□□□ 0.66
PIK3C2AO00443 TREHP1-201ENST00000531328 465 ntBASIC19.2■□□□□ 0.66
PIK3C2AO00443 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PIK3C2AO00443 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC19.2■□□□□ 0.66
PIK3C2AO00443 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 CICP14-201ENST00000629111 2732 ntBASIC19.19■□□□□ 0.66
PIK3C2AO00443 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 RN7SL596P-201ENST00000582123 288 ntBASIC19.19■□□□□ 0.66
PIK3C2AO00443 AP005264.6-204ENST00000588436 719 ntBASIC19.19■□□□□ 0.66
PIK3C2AO00443 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 AC006483.2-201ENST00000609813 515 ntBASIC19.19■□□□□ 0.66
PIK3C2AO00443 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 MARS-233ENST00000628866 2583 ntTSL 5 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.19■□□□□ 0.66
PIK3C2AO00443 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PIK3C2AO00443 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 AC244197.1-201ENST00000456494 951 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 RN7SL494P-201ENST00000461517 304 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 AC055811.3-201ENST00000584952 686 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 RPS5-204ENST00000598098 536 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 AL031673.1-201ENST00000611460 466 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 HMGB1P24-201ENST00000611897 328 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 WARS-203ENST00000358655 2466 ntTSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PIK3C2AO00443 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PIK3C2AO00443 FAM90A21P-201ENST00000510875 1396 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 FAM90A15P-201ENST00000514465 1395 ntBASIC19.18■□□□□ 0.66
PIK3C2AO00443 FAM90A6P-201ENST00000515148 1394 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms