Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AL596257.1-201ENST00000641463 2694 ntBASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AC138028.6-201ENST00000616106 1482 ntBASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 SLC25A24P2-201ENST00000415059 510 ntBASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 CHMP1AP1-201ENST00000445563 662 ntBASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AC021723.1-201ENST00000486306 515 ntBASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 AC084346.2-201ENST00000607097 949 ntBASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA3F8WFD2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC004945.1-201ENST00000416738 983 ntBASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC005077.2-201ENST00000449786 690 ntBASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 EIF4HP1-201ENST00000453115 687 ntBASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 IGHJ2P-201ENST00000454480 60 ntBASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC005730.2-201ENST00000564549 1184 ntBASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 MIR4683-201ENST00000579659 81 ntBASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
NPIPA3F8WFD2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NPIPA3F8WFD2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms