Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 TLE1P1-201ENST00000422965 589 ntBASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AP001582.1-201ENST00000525856 295 ntBASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 DUX4L27-201ENST00000554796 1261 ntBASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC120045.2-201ENST00000567334 178 ntBASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC015688.4-201ENST00000580780 1647 ntBASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 INTS4P2-202ENST00000614726 2019 ntBASIC14.87□□□□□ -0.03
TRIM49D1C9J1S8 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 AC023794.5-201ENST00000564380 2157 ntBASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 EIF3FP3-201ENST00000434851 1086 ntBASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 AC138761.1-201ENST00000584393 385 ntBASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 MIR6074-201ENST00000612054 107 ntBASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 HSPA8P5-201ENST00000456928 2069 ntBASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 MRPL37P1-201ENST00000592451 1337 ntBASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
TRIM49D1C9J1S8 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRIM49D1C9J1S8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms