Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 FTH1P22-201ENST00000456305 520 ntBASIC14.39□□□□□ -0.11
C4orf47A7E2U8 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 MIR3188-201ENST00000583494 85 ntBASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AC009560.1-201ENST00000620208 434 ntBASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AC133540.1-201ENST00000620845 1019 ntBASIC14.39□□□□□ -0.11
C4orf47A7E2U8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.39□□□□□ -0.11
C4orf47A7E2U8 CYP4F23P-201ENST00000593402 1579 ntBASIC14.39□□□□□ -0.11
C4orf47A7E2U8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AL357563.1-201ENST00000404728 395 ntBASIC14.38□□□□□ -0.11
C4orf47A7E2U8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 BCAS2P2-201ENST00000425064 674 ntBASIC14.38□□□□□ -0.11
C4orf47A7E2U8 ORAOV1P1-201ENST00000503108 395 ntBASIC14.38□□□□□ -0.11
C4orf47A7E2U8 FAM86KP-201ENST00000509817 987 ntBASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 MIR4472-1-201ENST00000584349 80 ntBASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AC073592.2-201ENST00000623062 780 ntBASIC14.38□□□□□ -0.11
C4orf47A7E2U8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
C4orf47A7E2U8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms