Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.16■□□□□ 0.18
CCDC66A2RUB6 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AC113367.3-201ENST00000508316 1912 ntBASIC16.15■□□□□ 0.18
CCDC66A2RUB6 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 CNN2P11-201ENST00000429351 262 ntBASIC16.15■□□□□ 0.18
CCDC66A2RUB6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 LINC01115-203ENST00000606068 577 ntBASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AC138969.3-201ENST00000546612 1459 ntBASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AC138932.2-201ENST00000548268 1459 ntBASIC16.15■□□□□ 0.18
CCDC66A2RUB6 AC126755.4-201ENST00000549796 1459 ntBASIC16.15■□□□□ 0.18
CCDC66A2RUB6 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CCDC66A2RUB6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC66A2RUB6 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
CCDC66A2RUB6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.14■□□□□ 0.18
CCDC66A2RUB6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CCDC66A2RUB6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CCDC66A2RUB6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AC114271.1-201ENST00000612689 2813 ntBASIC16.14■□□□□ 0.17
CCDC66A2RUB6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AC092183.1-201ENST00000469884 875 ntBASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AL512361.1-201ENST00000554200 418 ntBASIC16.14■□□□□ 0.17
CCDC66A2RUB6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
CCDC66A2RUB6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms