Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CR392000.1-201ENST00000624770 1228 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 DNAJC9-201ENST00000372950 3032 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 DNAI2-202ENST00000446837 2474 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 OACYLP-201ENST00000417918 2208 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 TADA2B-205ENST00000515646 3818 ntBASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
LINC01558Q9Y6Z2 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 FAM95B1-212ENST00000592873 4692 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ZSCAN21-201ENST00000292450 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 DNAJB12-203ENST00000444643 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 CICP2-201ENST00000420675 2328 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 PMS2P2-201ENST00000425039 1128 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC243562.2-201ENST00000561247 970 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 MIR6074-201ENST00000612054 107 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AC073592.5-201ENST00000624854 528 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AL157888.1-201ENST00000631930 593 ntBASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
LINC01558Q9Y6Z2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms