Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 LINP1-201ENST00000417112 917 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 EEF1GP8-201ENST00000506566 1154 ntBASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AL009176.1-201ENST00000607876 650 ntBASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AL031673.1-201ENST00000611460 466 ntBASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AL627230.2-201ENST00000613254 655 ntBASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 AC138761.6-201ENST00000583997 1423 ntBASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDC42BPBQ9Y5S2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 AC022532.1-201ENST00000624563 1728 ntBASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 RN7SKP155-201ENST00000516031 288 ntBASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC21.56■■□□□ 1.04
CDC42BPBQ9Y5S2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 PHB-210ENST00000511832 1509 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 OR10N1P-201ENST00000392758 869 ntBASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 MIR4265-201ENST00000582152 99 ntBASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 AC026336.4-201ENST00000624565 1050 ntBASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 HLA-DPA2-205ENST00000433582 733 ntBASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 AC068831.5-201ENST00000557387 328 ntBASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 AC018695.6-201ENST00000614011 534 ntBASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CDC42BPBQ9Y5S2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDC42BPBQ9Y5S2 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms