Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSX2IPQ9Y2D8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SSX2IPQ9Y2D8 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 AC105250.1-201ENST00000509378 2057 ntBASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 GRK6P1-201ENST00000400595 1711 ntBASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 SSR4P1-203ENST00000599569 2260 ntBASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 MARK2P5-201ENST00000507649 634 ntBASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 DUX4L46-201ENST00000566845 751 ntBASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.95■□□□□ 0.14
SSX2IPQ9Y2D8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AC004899.1-201ENST00000424687 1714 ntBASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AC010141.1-201ENST00000411585 623 ntBASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 CHMP4BP1-201ENST00000556017 588 ntBASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AL161670.2-201ENST00000557650 1227 ntBASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 MIR4683-201ENST00000579659 81 ntBASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AC097724.1-201ENST00000609581 426 ntBASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
SSX2IPQ9Y2D8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SSX2IPQ9Y2D8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms