Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.27□□□□□ -0.13
LHX6Q9UPM6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LHX6Q9UPM6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LHX6Q9UPM6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LHX6Q9UPM6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LHX6Q9UPM6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
LHX6Q9UPM6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC104073.2-201ENST00000453737 312 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 MARK2P5-201ENST00000507649 634 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 ADAD1P2-201ENST00000588476 646 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC112503.2-201ENST00000609005 552 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 BX539320.1-201ENST00000623759 877 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC020923.1-201ENST00000624021 917 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AL161773.1-201ENST00000624845 863 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 PRSS30P-206ENST00000641773 873 ntBASIC14.26□□□□□ -0.13
LHX6Q9UPM6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LHX6Q9UPM6 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 ACTBP8-201ENST00000403258 1108 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 MTATP6P11-201ENST00000428071 670 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 ZNF736P8Y-201ENST00000451913 669 ntBASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC14.25□□□□□ -0.13
LHX6Q9UPM6 VBP1-203ENST00000535916 944 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms