Protein–RNA interactions for Protein: Q9P2K3

RCOR3, REST corepressor 3, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3Q9P2K3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 AC079776.1-201ENST00000401540 1152 ntBASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 RAB43P1-201ENST00000561790 589 ntBASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 AL512343.1-201ENST00000605837 169 ntBASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCOR3Q9P2K3 AC064801.2-201ENST00000625052 1303 ntBASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 U91328.1-201ENST00000437528 223 ntBASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CTBP2P5-201ENST00000454986 1264 ntBASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 GPR53P-205ENST00000457298 1084 ntBASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 AL136301.1-201ENST00000615830 422 ntBASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SNX18-202ENST00000343017 3140 ntBASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.17■□□□□ 0.02
RCOR3Q9P2K3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 AC016397.2-201ENST00000624848 1985 ntBASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCOR3Q9P2K3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms