Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MIR1247-201ENST00000408206 136 ntBASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MIR3615-201ENST00000581999 87 ntBASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-206ENST00000376090 689 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-209ENST00000376096 565 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-210ENST00000376099 610 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 CD8B2-202ENST00000417670 633 ntBASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-214ENST00000418507 726 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 TLE1P1-201ENST00000422965 589 ntBASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 RHOQP1-201ENST00000555758 579 ntBASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AC015656.1-201ENST00000624209 3578 ntBASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 MYO15B-237ENST00000642007 4893 ntBASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.38□□□□□ -0.11
CUEDC1Q9NWM3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms